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Proceedings
Day 1 - Tuesday, September 26, 2000

TuOA Plenary
Proteomics Using Multidimensional Chromatography and Tandem Mass Spectrometry
Program Chair:John R. Yates, The Scripps Research Institute
TuOB
New Technologies and Approaches for Drug Metabolism
Discussion Leader:Bradley L. Ackermann, Eli Lilly and Co.
Mass spectrometry has long been recognized for its contribution to metabolite profiling and structural
identification. The advent of high duty cycle mass analyzers, such as ion traps and Q-TOF instruments, has led
to new applications and strategies for in vitro and in vivo assessment of drug biotransformation.
Concurrent with these advances has been a pervasive trend towards expanded metabolite profiling earlier along
the drug discovery/development timeline. This in turn has led to new bottlenecks imposed by data mining,
interpretation and reporting. Initial work by practitioners combined with the collaborative support of
vendors has led to a number of innovative solutions to these problems. In this session, we gain the perspective
of both parties on issues relating to both MS hardware and software.
Metabolite Profiling/ID: In Vitro and In Vivo Metabolism
Richard King, Merck
Kathleen Cox and Nigel J. Clarke, Schering-Plough Research Institute
Software/Hardware for Metabolite Profiling/ID
John Robson, MDS Sciex
Sara Kambouris, ThermoQuest
Steve Preece, Micromass
Roundtable Discussion 1
TuOC
Vendor/Exhibitor Session: Sample Preparation & Chromatography
Discussion Leaders: Patrick J. Rudewicz, Schering-Plough Research Institute
Pharmaceutical LC-MS laboratories continually search for new sample preparation and chromatographic techniques to
increase sample throughput and reduce the time required to get a drug to market. This session presents a critical
overview of state-of-the-art sample preparation techniques, including off-line automated 96-well plates and online
techniques such as the Prospekt system and turbulent flow chromatography. Future directions, including fast
chromatography, "grand trays", and microchip separations were also described.
Automated Sample Preparation in High Throughput LC-MS/MS Analysis
Danlin Wu, Purdue Pharma L.P.
Sample Preparation for LC-MS/MS Analysis - On-line versus Off-line
Yves G. Leblanc, MDS Pharma Services
High-Throughput SRM LC/MS Analyses: From 384 Multi-Well Plates to Chips
Jack D. Henion, Advanced Bioanalytical Services, Inc.
Roundtable Discussion 2
TuOD
Structure and Purity Determination: How Much and When?
Discussion Leaders: Todd A. Gillespie, Eli Lilly and Co. and Mike S. Lee, Milestone Development Services
The increased pressure to keep pace with high throughput sample generating technologies such as automated parallel
synthesis has created unique challenges for structure and purity determination. Selection of instrumentation and
development of the analytical method is dependent on the "how much and when?" requirements of the specific drug
development stage. This session explored the issues, needs, and preliminary benchmarks with regard to lead identification,
lead confirmation, and purification.
Using Fluorometric Microvolume Assay Technology (FMAT) for Lead Identification and
Characterization in High Throughput Drug Screening
Alison Watta, Applied Biosystems
High Resolution FTMS for High Throughput Structural Characterization
Marshall M. Seigel, Wyeth-Ayerst Research
High Throughput Purification
Tony Brand, Agilent Technologies
Roundtable Discussion 3
Poster Session
A Comparative Study of Parallel Artificial Membrane Permeability Assay for Passive Absorption Screening
Chengyue Zhu, Teng-man Chen, Kinkai Hwang Aventis Pharmaceuticals, Bridgewater, New Jersey
Determination of Drug Permeability by Filter-Immobilized Artificial Membranes and Detection by LC/MS
E. H. Block1, A. Avdeef2, M. Strafford2, B. Kenney1, M. Balogh1, K.
Yu1 1 Waters Corporation, Milford, MA 01757 2 pION, Inc. Woburn, MA 01801
Speeding Metabolic Stability Assays Using Automated, High Throughput LC/MS Techniques
K. Johnson1, J. Erve2, A. Dandeneau2, M. Swartz1, B. Kenney1
1 Waters Corporation, Milford, MA 01757 2 GENTEST Corporation, Woburn, MA 01801
Pharmacokinetic (PK) screening using high throughput sample preparation with a
TECAN robotic sample processor (Genesis 150) followed by On-line Extraction- HPLC/MS/MS
Hideji Fujiwara, J. Randy McKee, Kevin L. Duffin
Pharmacia Co, St. Louis, MO
Applications of High-Throughput Pharmaceutical Analysis using A Parallel
Turbulent flow chromatography / Tandem mass spectrometry (TFC-MS/MS) System
Daniel J. Magiera, Joe Takarewski, John Brann, Hubert M. Quinn
Cohesive Technologies Inc., Franklin, MA
Strategies for High-Throughput: Multi-Stream Serial LC/MS
Byron Kieser, Yves Leblanc, Tanya Gamble
Applied Biosystems MDS SCIEX, Concord, Ontario, Canada
Accelerated Selection of Lead Candidates Using Isolated Blood Perfused Organs with LC/MS/MS Analysis
C. Gerald Curtis1, M. Helen Hughes1, Kumar Ramu2, Ben Chien2
1 Bowman Research (UK), Newport, Gwent, UK
3 Quest Pharmaceutical Services, Newark, DE
Automated High Throughput Open Access LC/MS Reaction Monitoring in a Discovery Pharmaceutical Environment
Larry M. Mallis1, Ani Sarkahian1, William L. Watts, Jr.1, Kate Bathurst2,
George P. Hammond VI2, John Van Antwerp3, Ed Aig3, Ronan Cleary4
1 Discovery Analytical Chemistry, Chemical Sciences, Wyeth-Ayerst Research, Radnor, PA
2 Computer Support, Radnor, PA
3 Waters Corporation, Morristown, NJ 07960
4 Waters Corporation, Milford, MA 01757
TuOE Evening Session
How to Demo/Purchase an LC/MS Instrument: Experiences and Perspectives
Elaine K. Fukuda, Rutgers University
LCMS instrumentation has become ubiquitous in pharmaceutical laboratories. The proper choice of the most suitable LCMS is important
whether the instrument is the first purchase or an addition to an existing facility. In this session, a diverse group of LCMS
users and manufacturer representatives answered the following questions based on their personal experiences:
- What are the most important criteria to use when making an LCMS purchase?
- How do you structure a demo to obtain the most important information required for making a decision on an LCMS purchase?
- What pitfalls should be avoided?
Tony Brand, Agilent Technologies
Ashok R. Dongre, Bristol-Myers Squibb
Tom Driscoll, Micromass
Mark J. Hayward, Novartis
Patrick J. Rudewicz, Schering-Plough Research Institute
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