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Day 2
Vendor Session - Drug Discovery Technologies & Applications
Accurate and MSn Mass Spectra in Combination with Smart Processing Tools
for Metabolite Identification
C. Baessmann1, G. Zurek1, A. Germanus1, A. Ingendoh1; M. Shen2, C.
Stacey2, W.-D. Herzog3, V. Krone3
11Bruker Daltonik GmbH; 2Bruker Daltonics Inc., 3Aventis Pharma
An integrated strategy for metabolite identification based on standard
and high resolution MS and MSn mass spectra, and smart software tools is
presented. S9-fractions from rat liver were incubated with testosterone
and 14C-testosterone. Full scan LC-MS chromatograms (scan range:
50-1000 m/z) using electrospray ionization were acquired with an Esquire
HCTTM quadrupole ion trap and a microTOFTM orthogonal ESI time-of-flight
instruments (Bruker Daltonik GmbH, Bremen, Germany). The chromatograms
from different time points were compared using the eXpose algorithm of
the MetaboliteTools™ software. An especially adapted MSn acquisition
method for the quadrupole ion trap was automatically created. Full scan
mass spectra of metabolites exclusively detected in the incubation at
the respective time point are the result of the comparison by the eXpose
algorithm. Various hydroxylated, oxidized metabolites and the
glucuronide of testosterone were easily identified. The molecular
composition of the metabolites can be directly calculated from accurate
mass spectra from the ESI-TOF data. MSn data of the metabolites has
been acquired in a targeted MRM experiment with the ion trap. The
metabolites can be identified according to characteristic fragmentation.
The MSn spectra are saved into a mass spectral library to accelerate
future identifications. To confirm the results and 'validate' the new
eXpose detection algorithm, the S9-incubations were repeated with
14C-labeled testosterone. The additional radioactive trace allows the
unambiguous identification of testosterone metabolites.

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